CDS
| Accession Number | TCMCG081C15670 |
| gbkey | CDS |
| Protein Id | XP_002276085.1 |
| Location | complement(join(16943614..16943829,16943905..16944028,16944132..16944421)) |
| Gene | LOC100242602 |
| GeneID | 100242602 |
| Organism | Vitis vinifera |
Protein
| Length | 209aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA33471 |
| db_source | XM_002276049.3 |
| Definition | PREDICTED: casparian strip membrane protein 1 [Vitis vinifera] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE | - |
| KEGG_ko | - |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0003674
[VIEW IN EMBL-EBI] GO:0005488 [VIEW IN EMBL-EBI] GO:0048037 [VIEW IN EMBL-EBI] GO:0051536 [VIEW IN EMBL-EBI] GO:0051540 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGAGCAGCGGCGCCAACGCAACTACAATCGATGTCCCAGAGACAAGGGCTGAAGCCAAAGGGAAAGCCCCTCTCATTGCAGCTCCCATTGTTGCAACCACTAAAGCTACCCCACACCCGAATGCAGGATGGAAGAAGGGGCTTGCTATATTCGATTTCCTCCTAAGGCTAGCTGCTATAGCAGCTACACTGGCCGCTGCTACCACCATGGGAACTACTGATGAAACTCTTCCCTTCTTTACCCAGTTCTTCCAGTTCCAAGCTAGTTTTGACGACCTGCCTGCGTTTATGTTTTTCGTAGTTGCGACTGCTATAGCCAGTGGCTACCTCGCCCTCTCTCTACCCTTTTCATTAGTGAGCATCTTTCGCCCACATGCGCAGGGAATAAGGCTGCTTCTGATCATCTCTGACACTGTGATGCTTGCTTTGACCACGGCTGGGGCAGCCTCAGCGACTGCCATAGTTTACTTGGCACACAACGGCGACTCAAGCGCAAACTGGATAGCAATCTGTCAGCAATTTACTGATTTCTGCCAGAGTGTGAGCGGGGCTGTGGTGGCATCATTCATAGCTGTGGTTATCTTCATGTTGTTGGTTATGATGTCTGCCTTGGCTCTCAGAAAGCACTGA |
| Protein: MSSGANATTIDVPETRAEAKGKAPLIAAPIVATTKATPHPNAGWKKGLAIFDFLLRLAAIAATLAAATTMGTTDETLPFFTQFFQFQASFDDLPAFMFFVVATAIASGYLALSLPFSLVSIFRPHAQGIRLLLIISDTVMLALTTAGAASATAIVYLAHNGDSSANWIAICQQFTDFCQSVSGAVVASFIAVVIFMLLVMMSALALRKH |